Introduction
As the medical community continues to work towards better treatment of cancer
and other complex diseases such as Multiple Sclerosis and rheumatoid arthritis, it is
becoming apparent that no single treatment will be ideal for the entire
population of patients. Instead, the heterogeneity of these diseases will
require treatments targeted to specific subpopulations of patients who will most
benefit from the treatment while exhibiting the least severe side affects.
Sometimes called personalized medicine, this goal is being aided by gene
expression profiling. By comparing the gene expression profile of diseased
cells to healthy cells, researchers have been better able to characterize the
different forms of cancer. This can lead to more efficient drug discovery,
novel drug targets, and earlier diagnosis. Of recent interest, and the
primary focus of this site, is the comparison of gene expression profiles of a
population of cancer patients. Where an accurate prognosis is often
difficult based on current diagnostic techniques, clinical researchers are
looking to this expression profiling as a tool to allow doctors to better tailor
their patients treatment. Below are a couple of areas with which gene
expression profiling has shown an ability to predict patients groups that could
ultimately lead to more effective treatment. Risk
level of the progression of the disease - Where a particular cancer may
show a 50% survival rate over the entire population of patients, profile
classification has shown a continuum of risk levels. The most aggressive
forms of treatment, and their accompanying risk of side-affects or
complications, could be reserved for the patients facing the most dire outcomes. Responsiveness
to treatment - Some patients do not respond to traditional
chemotherapy. Unfortunately, their health is often too compromised
post-treatment to attempt alternative forms of treatment. Again profiling
research has shown the potential to identify these patients. Likewise,
where a new drug might be considered a clinical failure because of its low
success rate overall, it might have had near 100% success for a particular
sub-group. Drug
toxicity - With many current treatments, there are a number of patients
who react adversely to the treatment itself. Again, profile studies have
shown a potential to identify these patients. What's on this site?
Where patient stratification comes from powerful bioinformatic techniques,
that raw data for such analysis is acquired with the microarray. Based on
the amount of research over the last several years involving microarrays, it is
cleared that it has become an indispensable tool. In the links to the
left, the microarray is better described and it's use in gene expression
profiling is reviewed. Additionally, the power of this technique is
highlighted by reviewing some of the clinical research of Leukemia, a
particularly complex and varied form of cancer. The links sections
provides a number of sources for additional information on the above
subject. Finally, the information on this site was garnered from a number
of sources and are outlined in the references section.
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